Chestnut Blight QTL BAC Sequencing - Pool D - Illumina - SRA

SRX756026: Chestnut Blight QTL BAC Sequencing - Pool D - Illumina
2 ILLUMINA (Illumina MiSeq) runs: 3.1M spots, 1.6G bases, 1Gb downloads

Design: Sequencing of a pool of bacterial artifical clones selected from Chinese chestnut (Castanea mollissima) BAC libraries, pool D. The BACs were picked, DNA extracted and samples pooled. Paired end libraries (2x250) were prepared from each DNA pool and run twice.

Submitted by: University of Tennessee

Study: Castanea mollissima strain:Vanuxem Targeted Locus (Loci)

PRJNA266703 • SRP049640 • All experiments • All runs

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The integrated genetic and physical map for Chinese chestnut was utilized to identify bacterial artificial clones (BACs) located in the three previously identified QTL regions conferring blight resistance. The clones were pooled and sequenced. The BAC libraries publicly available through the Clemson University Genomics Institute (www.genome.clemson.edu)

Sample: Plant sample for Castanea mollissima

SAMN02640765 • SRS590911 • All experiments • All runs

Organism: Castanea mollissima

Library:

Name: CCPoolD2a

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: unspecified

Layout: PAIRED

Spot descriptor:

1 forward226 reverse

Runs: 2 runs, 3.1M spots, 1.6G bases, 1Gb

Run	# of Spots	# of Bases	Size	Published
SRR1646624	1,437,054	718.5M	487.2Mb	2014-11-26
SRR1646628	1,678,555	842.6M	574Mb	2014-11-26

ID:: 1092917

SRA

Sequence Read Archive

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